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Home · Families · GH · GH51_9

GH51_9 GH GH family — see CAZy reference

6
target proteins
6
CGCs
all
tree leaves
7
co-occurring families

Overview

ClassGH
Annotation sourcedbCAN consensus (HMM + DIAMOND, "recommended-result" column)
SSN sourceSubset of global_ssn.sqlite (DIAMOND e ≤ 1e-30)
Tree inputMUSCLE-super5 alignment of gh51_9_proteins.faa
Tree methodFastTreeMP −lg −nosupport

Phylogeny interactive · search MAG / protein

Sequence Similarity Network Cytoscape-openable session · 0.0 MB

Subset of the global SSN restricted to proteins from GH51_9 CGCs.

SSN
.cys
GH51_9_SSN.cys
Full GH51_9 SSN at e ≤ 1e-30. Node attributes: Leiden community, enzyme category, top annotation, global x/y. Edge attributes: bitscore, e-value.
Cytoscape session bundle · 0.0 MB
Download
To open in Cytoscape Desktop (free): File → Open and pick the .cys.

SCoNe co-occurrence community-level

Taxonomy sunburst GTDB drilldown

Host distribution CGCs per genome by group

GH51_9 host-group violin

Co-occurring subfamilies first 7 of 7 · .tsv

SubfamilyClassCGCs# genes# SSN clusters
GH51_9GH6——
GH2_10GH3——
S1_20S12——
S1_16S12——
GH2_19GH1——
S1_52S11——
GT20GT1——

Downloads

Full SSN (Cytoscape)GH51_9_SSN.cys · 0.0 MB
Newickgh51_9_phylogeny.nwk
MUSCLE alignmentgh51_9_phylogeny.aln.faa
Target proteins (FASTA)gh51_9_proteins.faa
All proteins in associated CGCssequences.faa
CGC listcgcs.txt
Co-occurring familiesranked_families.tsv