↵
Home · Families · GH · GH57_8

GH57_8 GH GH family — see CAZy reference

26
target proteins
26
CGCs
all
tree leaves
1
co-occurring families

Overview

ClassGH
Annotation sourcedbCAN consensus (HMM + DIAMOND, "recommended-result" column)
SSN sourceSubset of global_ssn.sqlite (DIAMOND e ≤ 1e-30)
Tree inputMUSCLE-super5 alignment of gh57_8_proteins.faa
Tree methodFastTreeMP −lg −nosupport

Phylogeny interactive · search MAG / protein

Sequence Similarity Network Cytoscape-openable session · 0.1 MB

Subset of the global SSN restricted to proteins from GH57_8 CGCs.

SSN
.cys
GH57_8_SSN.cys
Full GH57_8 SSN at e ≤ 1e-30. Node attributes: Leiden community, enzyme category, top annotation, global x/y. Edge attributes: bitscore, e-value.
Cytoscape session bundle · 0.1 MB
Download
To open in Cytoscape Desktop (free): File → Open and pick the .cys.

SCoNe co-occurrence community-level

Taxonomy sunburst GTDB drilldown

Host distribution CGCs per genome by group

GH57_8 host-group violin

Co-occurring subfamilies first 1 of 1 · .tsv

SubfamilyClassCGCs# genes# SSN clusters
GH57_8GH26——

Downloads

Full SSN (Cytoscape)GH57_8_SSN.cys · 0.1 MB
Newickgh57_8_phylogeny.nwk
MUSCLE alignmentgh57_8_phylogeny.aln.faa
Target proteins (FASTA)gh57_8_proteins.faa
All proteins in associated CGCssequences.faa
CGC listcgcs.txt
Co-occurring familiesranked_families.tsv