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Home · Families · S1 · S1_98

S1_98 S1 S1 family — see CAZy reference

2
target proteins
2
CGCs
4
co-occurring families

Overview

ClassS1
Annotation sourcedbCAN consensus (HMM + DIAMOND, "recommended-result" column)
SSN sourceSubset of global_ssn.sqlite (DIAMOND e ≤ 1e-30)

Sequence Similarity Network Cytoscape-openable session · 0.0 MB

Subset of the global SSN restricted to proteins from S1_98 CGCs.

SSN
.cys
S1_98_SSN.cys
Full S1_98 SSN at e ≤ 1e-30. Node attributes: Leiden community, enzyme category, top annotation, global x/y. Edge attributes: bitscore, e-value.
Cytoscape session bundle · 0.0 MB
Download
To open in Cytoscape Desktop (free): File → Open and pick the .cys.

SCoNe co-occurrence community-level

Taxonomy sunburst GTDB drilldown

Host distribution CGCs per genome by group

S1_98 host-group violin

Co-occurring subfamilies first 4 of 4 · .tsv

SubfamilyClassCGCs# genes# SSN clusters
S1_98S12——
GT2GT1——
GH3GH1——
GH149GH1——

Downloads

Full SSN (Cytoscape)S1_98_SSN.cys · 0.0 MB
Target proteins (FASTA)s1_98_proteins.faa
All proteins in associated CGCssequences.faa
CGC listcgcs.txt
Co-occurring familiesranked_families.tsv