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Desulfobacterota PHYLUM
GTDB lineage: d__Bacteria;p__Desulfobacterota
5,020
CGCs
516
host MAGs
187
Distinct CAZyme and Sulfatase subfamilies
Overview
| GTDB rank | phylum |
|---|---|
| GTDB lineage | d__Bacteria;p__Desulfobacterota |
| Host MAGs (with ≥1 CGC) | 516 of 22,607 |
| CGCs in this group | 5,020 |
| Distinct CAZyme and Sulfatase subfamilies | 187 |
Sequence Similarity Network
SSN
.cys
Download
.cys
To open in Cytoscape Desktop (free):
File → Open and pick the .cys. The bundled global x/y layout, node categories, and edge bitscores/e-values are all preloaded as attributes.
SCoNe co-occurrence
Top subfamilies
| Subfamily | Class | CGCs | # genes | # SSN clusters |
|---|---|---|---|---|
| GT2 | GT | 1,225 | — | — |
| GT4 | GT | 929 | — | — |
| GT119 | GT | 485 | — | — |
| GH23 | GH | 357 | — | — |
| GT9 | GT | 322 | — | — |
| GT28 | GT | 317 | — | — |
| GT51 | GT | 292 | — | — |
| GT35 | GT | 270 | — | — |
| GT30 | GT | 260 | — | — |
| GT19 | GT | 203 | — | — |
| GT5 | GT | 191 | — | — |
| GT81 | GT | 171 | — | — |
| GT105 | GT | 127 | — | — |
| GH102 | GH | 124 | — | — |
| CE11 | CE | 115 | — | — |
Downloads
| Full SSN (Cytoscape) | Desulfobacterota_SSN.cys · 34.0 MB |
|---|---|
| CGC list | cgcs.txt · 5,020 IDs |
| MAG list | mags.txt · 516 IDs |
| Ranked families | ranked_families.tsv · 187 families |