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Home · Families · GH · GH134

GH134 GH GH family — see CAZy reference

2
target proteins
2
CGCs
6
co-occurring families

Overview

ClassGH
Annotation sourcedbCAN consensus (HMM + DIAMOND, "recommended-result" column)
SSN sourceSubset of global_ssn.sqlite (DIAMOND e ≤ 1e-30)

Sequence Similarity Network Cytoscape-openable session · 0.0 MB

Subset of the global SSN restricted to proteins from GH134 CGCs.

SSN
.cys
GH134_SSN.cys
Full GH134 SSN at e ≤ 1e-30. Node attributes: Leiden community, enzyme category, top annotation, global x/y. Edge attributes: bitscore, e-value.
Cytoscape session bundle · 0.0 MB
Download
To open in Cytoscape Desktop (free): File → Open and pick the .cys.

SCoNe co-occurrence community-level

Taxonomy sunburst GTDB drilldown

Host distribution CGCs per genome by group

GH134 host-group violin

Co-occurring subfamilies first 6 of 6 · .tsv

SubfamilyClassCGCs# genes# SSN clusters
GH5_7GH2——
GH134GH2——
GT28GT1——
CE4CE1——
GH2_13GH1——
CBM35CBM1——

Downloads

Full SSN (Cytoscape)GH134_SSN.cys · 0.0 MB
Target proteins (FASTA)gh134_proteins.faa
All proteins in associated CGCssequences.faa
CGC listcgcs.txt
Co-occurring familiesranked_families.tsv