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Home · Families · GH · GH16_6

GH16_6 GH GH family — see CAZy reference

1
target proteins
1
CGCs
6
co-occurring families

Overview

ClassGH
Annotation sourcedbCAN consensus (HMM + DIAMOND, "recommended-result" column)
SSN sourceSubset of global_ssn.sqlite (DIAMOND e ≤ 1e-30)

Sequence Similarity Network Cytoscape-openable session · 0.0 MB

Subset of the global SSN restricted to proteins from GH16_6 CGCs.

SSN
.cys
GH16_6_SSN.cys
Full GH16_6 SSN at e ≤ 1e-30. Node attributes: Leiden community, enzyme category, top annotation, global x/y. Edge attributes: bitscore, e-value.
Cytoscape session bundle · 0.0 MB
Download
To open in Cytoscape Desktop (free): File → Open and pick the .cys.

SCoNe co-occurrence community-level

Taxonomy sunburst GTDB drilldown

Host distribution CGCs per genome by group

GH16_6 host-group violin

Co-occurring subfamilies first 6 of 6 · .tsv

SubfamilyClassCGCs# genes# SSN clusters
GH20GH2——
GH1GH1——
GH38GH1——
GH125GH1——
GH92GH1——
GH16_6GH1——

Downloads

Full SSN (Cytoscape)GH16_6_SSN.cys · 0.0 MB
Target proteins (FASTA)gh16_6_proteins.faa
All proteins in associated CGCssequences.faa
CGC listcgcs.txt
Co-occurring familiesranked_families.tsv