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Acidobacteriota PHYLUM
GTDB lineage: d__Bacteria;p__Acidobacteriota
3,491
CGCs
306
host MAGs
284
Distinct CAZyme and Sulfatase subfamilies
Overview
| GTDB rank | phylum |
|---|---|
| GTDB lineage | d__Bacteria;p__Acidobacteriota |
| Host MAGs (with ≥1 CGC) | 306 of 22,607 |
| CGCs in this group | 3,491 |
| Distinct CAZyme and Sulfatase subfamilies | 284 |
Sequence Similarity Network
SSN
.cys
Download
.cys
To open in Cytoscape Desktop (free):
File → Open and pick the .cys. The bundled global x/y layout, node categories, and edge bitscores/e-values are all preloaded as attributes.
SCoNe co-occurrence
Top subfamilies
| Subfamily | Class | CGCs | # genes | # SSN clusters |
|---|---|---|---|---|
| GT4 | GT | 1,040 | — | — |
| GT2 | GT | 581 | — | — |
| GT51 | GT | 145 | — | — |
| GH171 | GH | 142 | — | — |
| GH3 | GH | 137 | — | — |
| GT28 | GT | 108 | — | — |
| GT119 | GT | 104 | — | — |
| GH23 | GH | 94 | — | — |
| GT30 | GT | 82 | — | — |
| GT35 | GT | 68 | — | — |
| GH29 | GH | 65 | — | — |
| GT5 | GT | 60 | — | — |
| GH33 | GH | 60 | — | — |
| GT9 | GT | 54 | — | — |
| GT83 | GT | 50 | — | — |
Downloads
| Full SSN (Cytoscape) | Acidobacteriota_SSN.cys · 10.8 MB |
|---|---|
| CGC list | cgcs.txt · 3,491 IDs |
| MAG list | mags.txt · 306 IDs |
| Ranked families | ranked_families.tsv · 284 families |