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PL1_7 PL PL family — see CAZy reference
3
target proteins
3
CGCs
9
co-occurring families
Overview
| Class | PL |
|---|---|
| Annotation source | dbCAN consensus (HMM + DIAMOND, "recommended-result" column) |
| SSN source | Subset of global_ssn.sqlite (DIAMOND e ≤ 1e-30) |
Sequence Similarity Network
Subset of the global SSN restricted to proteins from PL1_7 CGCs.
SSN
.cys
Download
.cys
To open in Cytoscape Desktop (free):
File → Open and pick the .cys.SCoNe co-occurrence
Taxonomy sunburst
Host distribution
Co-occurring subfamilies
| Subfamily | Class | CGCs | # genes | # SSN clusters |
|---|---|---|---|---|
| PL1_7 | PL | 3 | — | — |
| GH105 | GH | 1 | — | — |
| CE8 | CE | 1 | — | — |
| GH43_10 | GH | 1 | — | — |
| PL1 | PL | 1 | — | — |
| S1_27 | S1 | 1 | — | — |
| GH43_5 | GH | 1 | — | — |
| GH51_1 | GH | 1 | — | — |
| GH43_4 | GH | 1 | — | — |
Downloads
| Full SSN (Cytoscape) | PL1_7_SSN.cys · 0.0 MB |
|---|---|
| Target proteins (FASTA) | pl1_7_proteins.faa |
| All proteins in associated CGCs | sequences.faa |
| CGC list | cgcs.txt |
| Co-occurring families | ranked_families.tsv |